RNAseq data of chondrocytes residing in the zone of calcified cartilage at the human cartilage-bone interface

This dataset contains raw and processed RNA-seq data generated to study the cells residing in the zone of calcified cartilage during osteoarthritis. A detailed description of the background and aim of the analysis can be found in the Research plan. The data includes FASTQ files, count matrices, and metadata tables linking samples to experimental conditions. Due to patient privacy concerns of raw transcriptomic data, the FASTQ files will not be published open access, but can only be received upon reasonable request and the completion of a Data Transfer Agreement.

Data en bronnen

Deze gegevensset heeft geen inhoud

Extra Informatie

Veld	Waarde
Titel	RNAseq data of chondrocytes residing in the zone of calcified cartilage at the human cartilage-bone interface
Omschrijving	This dataset contains raw and processed RNA-seq data generated to study the cells residing in the zone of calcified cartilage during osteoarthritis. A detailed description of the background and aim of the analysis can be found in the `Research plan`. The data includes FASTQ files, count matrices, and metadata tables linking samples to experimental conditions. Due to patient privacy concerns of raw transcriptomic data, the FASTQ files will not be published open access, but can only be received upon reasonable request and the completion of a Data Transfer Agreement.
Keywords	EMC
Contact points	Contact point 1 URI Naam Contact dataset owners via DataverseNL. Name (translations) Email rso@erasmusmc.nl Identifier URL https://doi.org/10.34894/HW5K0O
Publisher	Publisher 1 URI Naam Erasmus MC Name (translations) Email rso@erasmusmc.nl URL https://www.erasmusmc.nl/en/contact-details-and-directions Type Publisher note Publisher type Identifier NL-EMC
Creator	Creator 1 URI Naam van IJcken, Wilfred Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown Creator 2 URI Naam Veldman, Judith Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown Creator 3 URI Naam Richter, Heiko Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown Creator 4 URI Naam Sinram, Merve Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown Creator 5 URI Naam Schwab, Andrea Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown Creator 6 URI Naam van Osch, Gerjo Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown Creator 7 URI Naam Bertrand, Jessica Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown Creator 8 URI Naam Kops, Nicole Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown Creator 9 URI Naam den Dekker, Xander Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown Creator 10 URI Naam Hiscock, Kayleigh Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown Creator 11 URI Naam Farrell, Eric Name (translations) Email rso@erasmusmc.nl URL https://fdp.erasmusmc.nl/dataset/unknown Type Publisher note Publisher type Identifier unknown
Landing page	https://doi.org/10.34894/HW5K0O
Release date	2025-11-06T23:00:00+00:00
Modification date
In Series
Versie
Version notes
Identifier	doi:10.34894/HW5K0O
Frequency
Provenance
Type
Temporal coverage
Temporal resolution
Spatial coverage
Spatial resolution in meters
Access rights	http://publications.europa.eu/resource/authority/access-right/RESTRICTED
Other identifier
Theme	https://publications.europa.eu/resource/authority/data-theme/HEAL
Taal	http://id.loc.gov/vocabulary/iso639-1/en
Documentation
Conforms to
Is referenced by
Distribution
Sample
Analytics
Applicable legislation	http://data.europa.eu/eli/reg/2016/679/oj
Has version	1.0
Code values
Coding system
Purpose
Health category
Health theme
Legal basis
Minimum typical age
Maximum typical age
Number of records
Number of records for unique individuals.
Personal data
Publisher note
Publisher type
Trusted Data Holder
Population coverage
Retention period
Health data access body
Qualified relation
Provenance activity
Qualified attribution
Quality annotations
URI	https://fdp.erasmusmc.nl/dataset/5c1e0b0b-8560-4c48-b3ad-d5704c8b569f